METABOLITOS SINTETIZADOS
EN LA SIMBIOSIS MICORRÍCICA:

DE LA RAÍZ A LAS PARTES AÉREAS

METABOLITES SYNTHESIZED IN THE MYCORRHIZAL
SYMBIOSIS: FROM THE ROOT TO THE AERIAL PARTS

Kena Casarrubias Castillo

Universidad de Guadalajara, México

Marco Miguel Plancarte de la Torre

Universidad de Guadalajara, México

Ernesto Ramírez Briones

Universidad de Guadalajara, México

Julia Zañudo Hernández

Universidad de Guadalajara, México
pág. 2981
DOI:
https://doi.org/10.37811/cl_rcm.v10i3.24283
Metabolitos Sintetizados en la Simbiosis Micorrícica: De la Raíz a las
Partes Aéreas

Kena Casarrubias Castillo
1
kena.casarrubias@academicos.udg.mx

https://orcid.org/0000-0003-1831-8642

Universidad de Guadalajara

Centro Universitario de Ciencias Biológicas y
agropecuarias

Departamento de Ecología Aplicada

México

Marco Miguel Plancarte de la Torre

marco.plancarte@academicos.udg.mx

https://orcid.org/0000-0003-1831-8642

Universidad de Guadalajara.

Centro Universitario de

Ciencias Biológicas y agropecuarias

Departamento de Ecología Aplicada

México

Ernesto Ramírez Briones

ernestor.briones@academicos.udg.mx

https://orcid.org/0000-0002-1428-2542

Universidad de Guadalajara

México

Julia Zañudo Hernández

julia.zanudo@academicos.udg.mx

https://orcid.org/0000-0002-0834-6626

Universidad de Guadalajara

México

RESUMEN

Los hongos micorrícicos arbusculares (HMA) forman la asociación simbiótica más frecuente (80%)
con las raíces de las plantas terrestres. Esta relación se establece mediante un diálogo de señalización
que comienza en el suelo, induciendo cambios fisiológicos en toda la planta. Tras el contacto físico
entre las hifas fúngicas y la raíz, los HMA desarrollan estructuras especializadas dentro de las células
corticales. Posteriormente, la colonización interna del hongo facilita el intercambio de nutrientes entre
ambos organismos. Hace tres décadas, se descubrió que la inoculación con HMA aumenta los niveles
de ciertos aminoácidos y proteínas solubles, lo que demuestra que esta asociación simbiótica altera
significativamente el metabolismo de la planta. Durante la simbiosis, los compuestos sintetizados como
respuesta defensiva a la presencia del hongo pueden inducir cambios en los metabolitos secundarios y
los compuestos bioactivos en diversos tejidos vegetales. Esta revisión describe cómo se activan los
metabolitos en respuesta a los HMA, así como su función ante estímulos adicionales como el estrés
abiótico y biótico.

Palabras clave: h
ongos micorrícicos arbusculares; estrés; metabolitos
1
Autor principal.
Correspondencia:
julia.zanudo@academicos.udg.mx
pág. 2982
Metabolites
Synthesized in the Mycorrhizal Symbiosis: From the Root to
the
Aerial Parts
ABSTRACT

Arbuscular mycorrhizal fungi (AMF) form the most prevalent symbiotic association (80%) with the

roots of terrestrial plants. This relationship is established through a signaling dialogue that begins in the

soil, inducing physiological changes across the pl
ant. Upon physical contact between fungal hyphae
and the root, AMF develop specialized structures within the cortical cells. Subsequently, internal fungal

colonization facilitates the exchange of nutrients between both organisms.
Three decades ago, it was
discovered that AMF inoculation increases levels of certain amino acids and soluble proteins,

demonstrating that this symbiotic association significantly alters plant metabolism. During symbiosis,

compounds synthesized as a defense response to the fungal p
resence can induce changes in secondary
metabolites and bioactive compounds throughout various plant tissues.
This review describes how
metabolites are activated in response to AMF, as well as their role under additional stimuli such as

abiotic and biotic
stress.
Keywords
: arbuscular mycorrhizal fungi; stress; metabolites
Artículo recibido 25
abril 2026
Aceptado para publicación: 25
mayo 2026
pág. 2983
INTRODUC
TION
Arbuscular mycorrhizal fungi (AMF) symbiosis is the most widespread among land plants;

approximately 80% of species establish this association. Indeed, it is believed that terrestrial plant life

was made possible by this symbiosis (Selosse
& Le Tacon, 1998; Redecker et al., 2000; Brundrett,
2009; Wang
et al., 2010). Root colonization by AMF alters plant physiology and the production of
phytohormones. Both partners interact through a molecular dialogue initiated by physical interaction in

the soil.

Strigolactones are plant hormones identified as root
-exuded signals recognized by AMF. Upon
perceiving these signals, fungal hyphae begin to expand to facilitate root contact. The fungus then

produces chitin oligomers (CO) and lipo
-chito-oligosaccharides (LCO), which act as signals to induce
changes in calcium levels and gene expression within the plant. Receptors with lysin
-motifs (LysM) are
required for successful mycorrhization; these receptors are also involved in the perception of LCOs

derived from fun
gal cell walls. This mechanism helps plants discriminate endosymbionts from
pathogenic microorganisms using structurally related LCOs and COs (Gough
& Cullimore, 2011;
Oldroyd, 2013; Rush
et al., 2020).
Among strigolactones are the so
-called "branching factors" (Buee et al., 2000) that trigger CO
production (Genre
et al., 2013). However, the specific structure of strigolactones depends on the plant
species and its interaction with the fungal species (Kee
et al., 2023). For example, in Eustoma
grandiflorum
(Gentianaceae), the monoterpene glycosides gentiopicroside and swertiamarin were
found in response to gibberellin (GA) treatment. These compounds stimulate hyphal branching in

Rhizophagus irregularis
and R. clarus (Glomerales) but do not induce branching in Gigaspora
margarita
(Diversisporales) (Tominaga et al., 2023).
When the fungal hyphae and plant root make physical contact, AMF develop structures within the inner

cortical cells. The hyphae then form tree
-like structures called arbuscules, which serve as the physical
site for nutrient exchange: the plant receives pho
sphorus (P) and nitrogen (N), while the fungus receives
carbon (C) from the host.

Approximately 30 years ago, it was discovered that certain amino acids and soluble proteins increased

following AMF inoculation in soybean, maize, and tobacco plants (Pacovsky, 1989; Dumas
et al., 1990;
pág. 2984
Charest
et al., 1993), demonstrating that this symbiotic association alters plant metabolism. A
metabolome analysis represents the physiological status of the plant and provides a comprehensive view

of the adaptive capacities conferred by the plasticity of each species
(Sardans et al., 2011).
During mycorrhizal symbiosis, compounds typically associated with defensive responses to fungal

colonization are synthesized. These signaling mechanisms between the host plant and fungi may induce

changes in secondary metabolite content, as well as specifi
c bioactive compounds in fruits, leaves,
shoots, and roots (Table 1). Understanding the dynamics of specialized metabolites within the

mutualistic or parasitic AMF relationship offers deeper molecular insight into this symbiosis. These

molecules play a sig
nificant role in all stages of the process, from spore germination and hyphal
branching to the establishment of a functional association (Akiyama
et al., 2005; Genre et al., 2013).
Table 1
. Metabolites that have been investigated for single AMF effects and/or upon biotic-abiotic.
Specie
Fungal specie Tissue Metabolite Analytical
method

Reference

Libidibia ferrea
C. etunicatum Leaves Gallic acid HPLC-PDA (Queiroz et al.,
2014)

Ocimum
basilicum

G. intraradices

G. etunicatum

G. fasciculatum1

Aerial parts
Linalool,
Eugenol, Ocimene, Methyl

chavicol, Farnesol and

Humulene

GC

UFC

(Rasouli
-
sadaghiani et

al., 2010b)

Artemisia annua
G. macrocarpum
G. fasciculatum
1
Leaves
Artemisinin HLPC (Evelin and
Kapoor, 2014)

Anadenanthera

colubrine

G. albida

A. longula

Leaves
Carbohydrates, Flavonoids,
Phenolics and Tannins

Spectrophoto

meter

(Pedone
-
bonfim et al.,

2012)

Ocimum
basilicum

G. caledonium
1
G. mosseae

Shoots
3
Roots

Rosmarinic acid and Caffeic

acid

HLPC
(Toussaint et
al., 2007)

Hypericum

perforatum

R. intraradices

F. mosseae2

AMF mix

(G. constrictum,

G. geosporum,

F. mosseae, and

R. intraradices)

Shoots
Hypericin and
Pseudohypericin

HPLC-FLD,

HPLC-DAD

(Zubek et al.,

2012)

Inula ensifolia
G. intraradices3
G. clarum
1
Roots

Shoots
3
Thymol derivatives
NMR
MS

(Zubek et al.,

2010)

Cynara

scolymus

G. intraradices
1
G. mosseae

Leaves

Flowers

Phenolic content and

Antioxidant activity

spectrophoto
meter.

(Ceccarelli et

al., 2010)

Arnica montana
G. geosporum
G. constrictum

G. intraradices
1
Mixture thereof and

G. mosseae

Shoots

Roots
2
Sesquiterpene lactones
UV spectra
HPLC
-DAD
MS
-API-ESI
(Jurkiewicz et

al., 2010)

Leaves
Phenolic content
Vitis vinifera
G. mosseae1
G. fasciculatum

G. intraradices

Mixture thereof

Leaves

Roots
2
Phenol content
UV
spectrophoto

metry

HPLC

(Eftekhari et

al., 2012)

Leaves

Stem

Flavonoid quercetin
pág. 2985
Solanum

lycopersicum

R. irregularis

F. mosseae

Roots
Ferulic acid, Cumaryl alcohol,
Coniferyl alcohol,

Benzylisoquinoline Alkaloids,

Spermidine,

Triferuloyl spermidine,

Products derived from the

oxylipin pathway and Amino

acids
3
(Tryptophan, Tyrosine,

Phenylalanine, Alanine, and

Leucine)

HPLC

LC
ESI Q-
TOF MS

(Rivero et al.,

2015)

Triticum durum

Desf

AMF Mix

(S. calospora,

A. laevis,

G. aggregatum,

R. irregulare,

F.
mosseae,
G. fasciculatum,

G. etunicatum,

G. deserticola, and G.

margarita)

PGPR+AMF
1
Roots
Amino acids3
(Glutamic acid, Alanine,

Asparagine and

Phenylalanine) and

Fatty acids
3
GC
-TOF-MS
HILIC
-Q-
TOF
-MS
(Saia et al.,

2015)

Lotus japonicus
G. mosseae Source
leaves

Sink leaves

Amino acid metabolism
3
(Glutamic acid, Aspartic acid,

Glycine, Asparagine, 4
-
aminobutanoic acid, 2
-methyl-
malic acid)

Organic acids
3
(Malic acid, Citric acid and

Succinic acid)

Kestose, Xylitol and Myo
-
inositol

GC
MS (Fester et al.,
2011)

Salix purpurea
R. irregularis Leaves Amino acids3, Carbohydrates3
Coumaroylquinate,

Caffeoyl
-shikimate,
OPC6
-CoA, trans-2-enoyl-
OPC6
-CoA,
JA, Iso
-JA,
Pinostrobin, Isoformononetin,

Rutin, Luteolin
-7-O-
glucoside,

Porphyrin, Chlorophyll,

Phenolic glycosides and

Terpenoids

MS

H NMR

(Aliferis et al.,

2015a)

Zea mays
G. intraradices Leaves Amino acids3
Organic acids, Lipids, Fatty

acids, Carotenoids,

Antioxidants, Carbohydrates,

α
- amyrin and β-amyrin
ICP
-MS
LC
-MS
HPLC

(Gerlach et al.,

2015a)
pág. 2986
Hordeum

vulgare

AMF mix

(G. mosseae and

G. intraradices)

Leaves
Sucrose3,
Amino acids
3
(Glutamic acid and Aspartate),

Chlorophyll
3, Lutein3, and
Glutathione
3
Free hexoses (3PGA,

PEP, RuBP, Glc1P),

Free inorganic phosphate and

Carboxylates isocitrate and

malate

ESI
-MS
ion exchange

chromatograp

hy

HPLC

Spectrophoto

meter

(Kogel et al.,

2010)

Medicago

truncatula

R. irregularis
Roots Amino acids
(Glutamic acid, Aspartic acid,

and Asparagine)

Trehalose, Palmitic acid, Oleic

acids, Cyclohexanone,

Mycorradicin derivatives,

Daidzein, ononin,

Malonylononin

cyclohexanone, Mycorradicin

derivatives,

Glucosides of blumenol C,

13
-hydroxyblumenol C,
Malonyl conjugates and

Tyrosol

GC
MS
HPLC

LC
MS.
(Schliemann

et al., 2008)

Medicago

truncatula

R. irregularis
Roots Propionyl carnitines,
Butyryl carnitines,

13
-hydroxylblumenol C 9-O-
β
-malonylglucoside,
blumenol C 9
-O-β-
malonylglucoside,

Daidzein, Ononin and

Malonylononin

UHPLC
HR
MS

MS
-Q-TOF
(Laparre et al.,

2014)

Lotus japonicus
R. irregularis Roots glucosylceramide,
dihexosylceramide,

inositolphosphorylceramide,

palmitic acid,

palmitvaccenic acid,

free sterols, sterol esters, sterol

glucosides, acylated sterol

glucosides

palmitvaccenic (di
-16:1)2
tetracosanoic (24:1) acyl

groups
2
MS/MS Q
-
TOF

TLC

GC

HPL

(Wewer et al.,

2014)

Extraradica
l
mycelium

palmitvaccenic (di
-16:1) and
tetracosanoic (24:1) acyl

groups

Solanum

lycopersicum

G. mosseae
Fruits Amino acids
(Glutamine and asparagine)

and

GC
-MS (Zouari et al.,
2014)

Veronica

chamaedrys

R. irregularis
Leaves Sugar alcohol mannitol GCMS
LC
-MS
GC
-DSQII
(Schweiger et

al., 2014)

Medicago

truncatula

Leaves
Pinitol,
Ononitol,
pág. 2987
Organic acids
3 (Citrate,
Malate, Fumarate, Succinate

and Isocitrate)

uHPLC
-ToF-
MS

Plantago

lanceolata and

Plantago major

Leaves
Sorbitol,
Catalpol
(only in P. lanceolata)
Plantago
lanceolata,
Plantago major
and

Veronica

chamaedrys

Leaves
Aucubin and Verbascoside
Organic acids
3 (Citrate,
Malate, Fumarate, Succinate

and isocitrate)

Poa annua
Leaves Organic acids3 (Citrate,
Malate, Fumarate, Succinate

and isocitrate)

Plantago
lanceolata
and
fungivores
treatmen
(Folsomia
candida)

G. intraradices
1
G. custos
2
Mixture thereof

Shoots
Catalpol3, Verbascoside
and Aucubin
2
HPLC
(Duhamel et
al., 2013)

Roots
Catalpol,2 Verbascoside3 and
Aucubin
2
Hyphae
Catalpol
Plantago
lanceolata

G. intraradices
Roots Aucubin HPLC (Kempel et al.,
2010)

Plantago
lanceolata

G. intraradices
Roots Aucubin HPLC (De Deyn et
al., 2009)

Medicago

truncatula

and Medicago

truncatula

mutant mtha1
-22
G. intraradices
Leaves Phosphate, Sulfate,
Nitrate, Citrate, Fumarate and

Chloride

HPAE
(Hubberten et
al., 2015)

Solanum

lycopersicum

G. mosseae
1
G. intraradices

Roots
OPDA, JA-Ile and SA UPLC-MS (López-Ráez
et al., 2010)

Olea europaea
G. intraradices Leaves α-linolenic acid (C18:3ω3 GC (Mechri et al.,
2014)

Trigonella

foenumgraecum

G. intraradices
Leaves
Roots

Antioxidant capacity

Ascorbic acid,
α-tocopherol,
Glutathione, and Carotenoids

spectrophoto
meter

(Evelin and

Kapoor, 2014)

Solanum

lycopersicum

G. mosseae
Roots Antioxidant capacity and
Malonaldehyde
2
spectrophoto

meter

(
ZhongQun
et al., 2007)

Solanum

lycopersicum

G. intraradices
Shoots Proline and
Reactive oxygen species

spectrophoto

meter

(Hajiboland et

al., 2010)

Cajanus cajan
G. mosseae Roots
Shoots

Proline and

Glycine betaine

spectrophoto
meter

(Garg and

Manchanda,

2009)

Zea mays
Other AMF
G. etunicatum
1
G. intraradices
1
Leaves
Proline,
Malondialdehyde and

Soluble sugar

spectrophoto

meter

(Chen et al.,

2014)
pág. 2988
Zea mays
G. etunicatum Shoots
Roots

Photosynthetic capacity
- (Zhu et al.,
2010)

Zea mays
G. mosseae Leaves Amino acids,3
Proline,
3
Formic acid
3 and
Succinic acid
3
HPLC
(Sheng et al.,
2011)

Fragaria

ananassa

G. mosseae
Leaves Antioxidant capacity
proline

-
(Yin et al.,
2010)

Zea mays
G. etunicatum Leaves
Roots
3
Proline
- (Zhu et al.,
2011)

Solanum

lycopersicum

AFM Mix

(G. mosseae,

G. intraradices and

Glomus sp.)

Leaves

Roots
3
Essential Isoprenoids

-thujene, α-pinene,
D4
-carene, β-phellandrene,
Limonene and linalool) and

Nonessential Isoprenoids
3
T
-system to
two
-stage
traps

GC
-MS
HPLC

(Asensio et al.,

2012)

Roots
Apocarotenoids, and
Strigolactones

Calopogonium

mucunoides

G. etunicatum
Leaves Aspartate, Glutamine,
Glycine, Threonine, Alanine,

Isoleucine and Gamma
-
aminobutiric acid

Asparagine
3,
Histidine
3
and Arginine
3
RP
-HPLC (Souza et al.,
2014)

Cichorium

intybus

R. irregularis

Shoots
Caftaric acid and Cichoric acid RF-HPLC (Rozpadek et
al., 2014)

Roots

Sesquiterpene lactones,

8
-DeoxyLC, Jacq and LPikr
Sorghum spp.
AFM mix
(G. intraradices,

G. mosseae,

G. aggregatum, and G.

etunicatum)

Roots

Shoots

Glycerol
-3-galactoside,
Erythrose, adenine,

5
-methoxytryptamine,
4
-hydroxybenzoate,
Arginine, Proline,

Starch and Sucrose

metabolism and

lipid metabolism (only with

PGPB)

ALEX
-CIS
GC
-TOF MS
(Dhawi et al.,

2016)

Asclepias
spp. R. intraradices, F.
mosseae, G.

aggregatum, and C.

etunicatum

Root
Non-Polar
Cardenolides and Polar

cardenolides

UPLC
(Vannette et
al., 2013)

Leaves
Non-Polar cardenolides
Plantago

lanceolata

G. intraradices
Shoots (Z)-3-hexenyl acetate GC-MS
HPLC

LC
-MS
(Fontana et al.,

2009)

Zea mays
G. mosseae Roots
Leaves

2,4
-dihydroxy-7-methoxy-
2H
-1,4-benzoxazin-3(4 H)-
one

HPLC
(Song et al.,
2013)

1. More efficient symbiont

2. No differences being noted

3. Lowest concentration/or negative impact/down
-regulate
pág. 2989
Since modulating the plant metabolome can prevent antagonistic defense responses, it may also prepare

plants for enhanced tolerance to environmental stress. These metabolites influence the outcome of the

association through the composition and exchange of
both primary and specialized compounds. Thus,
the specificity of the plant
-AMF interaction is regulated by changes in the plant’s primary and
specialized metabolome (Kaur & Suseela, 2020).

Although the leaf metabolome in AMF associations has been previously reported (Schweiger
& Müller,
2015), the roots of mycorrhizal plants have often been overlooked. This review describes current

findings on metabolites triggered in response to AMF, while also considering additional stimuli such

as abiotic or biotic stress across all plant tiss
ues.
METHODOLOGY

The methodology includes the revision of re
search documents from the last 37 years. Similarly, for this
literature review, authors were added based on their relevance and pertinence, according to the topics

presented.

Metabolic changes upon AMF colonization in medicinal plants

Currently, while the synthesis of specific compounds is possible, low yields often make it economically

unviable for drug production. However, AMF can enhance the concentrations of certain compounds. A

notable example is gallic acid in
Libidibia ferrea; when inoculated with Claroideoglomus etunicatum,
the plant shows an increase in production compared to non
-inoculated controls. A proposed mechanism
for this influence is the activation of the shikimic acid metabolic pathway, which is a precursor to

phenolic
compounds (Silva et al., 2014).
Furthermore, essential oil content was evaluated in the aerial parts of basil (
Ocimum basilicum)
inoculated with
Glomus intraradices, Glomus etunicatum, and Glomus fasciculatum. The results
revealed that plants inoculated specifically with
G. fasciculatum showed a significant increase in
linalool, followed by eugenol, ocimene, methyl chavicol, farnesol, and humulene, among other

compounds (Rasouli
-Sadaghiani et al., 2010).
In some cases, the availability of phosphorus (P), nitrogen (N), or both in the soil enhances the

efficiency of mycorrhizal inoculation and improves metabolite production. Examples include increased

levels of artemisinin (Kapoor
et al., 2007), proteins and carbohydrates (Pedone-Bonfim et al., 2012),
pág. 2990
antioxidant phytochemicals (Toussaint
et al., 2007; Zubek et al., 2010, 2012), and colchicine (Pandey
et al
., 2014).
Specifically, inoculation with
Glomus macrocarpum and G. fasciculatum increased the artemisinin
concentration in
Artemisia annua, with G. fasciculatum proving to be the more efficient symbiont.
However, phosphate fertilization can alter the extent of these AMF
-induced effects on artemisinin
production (Kapoor et al., 2007).

In cebil plants inoculated with a mixed consortium of
Gigaspora albida and Acaulospora longula, the
content of proteins, carbohydrates, flavonoids, phenolics, and tannins in the leaves increased.

Nevertheless, this benefit to primary metabolism was mitigated at higher P levels (Pedone
-Bonfim et
al
., 2012). Similarly, in pepper seedlings (Capsicum chinense) inoculated with Entrophospora
etunicata
, significant metabolic increases were recorded compared to the control: 77% higher soluble
carbohydrates, 147% mo
re total proanthocyanidins, 140% more total phenols, and 136% more total
saponins. These increases were also reflected in the concentrations of total proteins and foliar flavonoids

(Ribeiro da Luz
et al., 2023).
Higher accumulation of antioxidant compounds, such as rosmarinic and caffeic acids, has been reported

in sweet basil shoots (
Ocimum basilicum) inoculated with different Glomus species, specifically G.
caledonium
and G. mosseae. However, these effects might be attributed to improved phosphorus (P)
nutrition via AMF. Plants colonized by
G. caledonium yield higher concentrations of these acids
compared to non
-mycorrhizal plants.
A possible mechanism by which
G. caledonium and G. mosseae increase these phytochemical
concentrations is through enhanced nitrogen (N) assimilation. This could contribute to the production

of amino acids like tyrosine and phenylalanine, which are essential precursors for phenylalanine

ammonia
-lyase (PAL), the primary enzyme involved in the biosynthesis of rosmarinic and caffeic acids
(Toussaint
et al., 2007). In Hypericum perforatum, inoculation with Rhizophagus intraradices and an
AMF consortium (
Glomus constrictum, G. geosporum, Funneliformis mosseae, and R. intraradices)
improved the concentration of the anthraquinone derivatives hypericin and pseudohypericin in shoots,

even with relatively high soil P content; notably, no significant differences were observed in the
F.
mosseae
treatment (Zubek et al., 2012).
pág. 2991
Experiments with various fungal strains have induced distinct metabolic changes. For instance,
Inula
ensifolia
was inoculated with two strains of G. intraradices and Glomus clarum. These AMF species
influenced the production of thymol derivatives differently: the highest concentration of all analyzed

compounds in the roots was found after
G. clarum inoculation, while the lowest concentrations were
detected in the
G. intraradices treatments. Conversely, mycorrhizal plants were characterized by lower
concentr
ations in the shoots (Zubek et al., 2010).
A significant increase in total phenolic content and antioxidant activity was recorded in the leaves and

flowers of artichoke plants inoculated with
G. intraradices and G. mosseae in both greenhouse and field
experiments, with
G. intraradices being more effective in stimulating these secondary metabolites
(Ceccarelli
et al., 2010).
Mycorrhization was performed in
Arnica montana at low N and P levels using different AMF species,
namely
G. geosporum, G. constrictum, G. intraradices, and a consortium composed of the
aforementioned species plus
G. mosseae. The analysis showed that the concentration of sesquiterpene
lactones was significantly higher in shoots than in roots. In leaves, the total phenolic acid concentration

was higher in plants inoculated with
G. intraradices (Jurkiewicz et al., 2010).
On the other hand, the treatments significantly increased the levels of sesquiterpenic acids in the

rhizomes and roots of
Valeriana officinalis (Nell et al., 2010). Similarly, a study on Melissa officinalis
reported an increased content of two phenolic compounds (rosmarinic and lithospermic acids) in the

presence of three AMF mixtures; however, these compounds decreased in
Majorana hortensis (Engel
et al
., 2016).
Finally, the vegetative parts (leaf and stem) of various grape varieties were inoculated with
G. mosseae,
G
. fasciculatum, G. intraradices, and a consortium of these three species. The results showed a
significantly higher total phenol content in leaf tissues compared to control plants, whereas no

significant differences were found in root tissues. Furthermore, the vegetative parts of grape
plants
inoculated with AMF were found to be rich sources of the flavonoid quercetin (Eftekhari
et al., 2012).
Metabolites in Targeted and Untargeted Approaches

Metabolomics approaches allow for the separation and detection of a wide range of metabolites through

gas chromatography
-mass spectrometry (GC-MS), liquid chromatography-mass spectrometry (LC-
pág. 2992
MS), and nuclear magnetic resonance (NMR). These procedures offer the highest capacity for

determining extensive metabolite sets, estimated between 100,000 and 200,000 (Sardans
et al., 2011).
Observations on metabolic alterations by Rivero and coworkers identified significant shifts in tomato

roots inoculated with two common AMF:
Rhizophagus irregularis and F. mosseae. Products derived
from amino acids, such as phenolic alcohol derivatives, benzylisoquinolines, and conjugated

polyamines, were significantly affected in AMF
colonized plants.
Specifically, high quantities of ferulic acid, coumaryl alcohol, coniferyl alcohol, benzylisoquinoline

alkaloids, polyamines (and their conjugates), a putative spermidine, triferuloyl spermidine, and oxylipin

pathway derivatives were found in colonized roo
ts. Conversely, a negative impact was observed on free
amino acids such as tryptophan, tyrosine, phenylalanine, alanine, and leucine. The lower concentration

of these free amino acids suggests their role as precursors for secondary metabolites
, particularly
tyrosine and phenylalanine, which are essential for phenylpropanoid biosynthesis (Rivero
et al., 2015).
Similarly, wheat roots inoculated with a consortium of AMF species (
Scutellospora calospora,
Acaulospora laevis
, Glomus aggregatum, G. etunicatum, G. deserticola, Gigaspora margarita, R.
irregularis
, F. mosseae, and G. fasciculatum) showed decreased concentrations of glutamic acid,
alanine, asparagine, phenylalanine, and saturated fatty acids. In contrast, dual inoculation with PGPR

and AMF increased their accumulation, suggesting that PGPR enhances nitrogen (N) availability,

partic
ularly ammonium and nitrate, for the host plant (Saia et al., 2015).
A decrease in amino acid metabolism has been previously reported in the association between
Lotus
japonicus
and G. mosseae. This symbiosis results in a reduction of amino acid metabolism
specifically affecting glutamic acid, aspartic acid, glycine, asparagine, 4
-aminobutanoic acid (GABA),
and 2
-methylmalic acid in both source and sink leaves. Furthermore, organic acids involved in central
catabolic pathways, such as malic, citric, and succinic acids, are also reduced. Conversely, an increase

in kestose, x
ylitol, and myo-inositol has been observed; these compounds serve as indicators of stress
response in
L. japonicus (Fester et al., 2011).
In another association involving willow and R. irregularis, leaf metabolic content was significantly

altered. Results revealed that mycorrhization has a negative impact on primary metabolism, primarily

affecting amino acids and carbohydrates. In contrast,
an up-regulation was observed in several
pág. 2993
biosynthetic pathways, including those for phenylpropanoids, flavonoids, isoflavonoids,

coumaroylquinate, and caffeoyl
-shikimate. Additionally, increases were noted in jasmonic acid (JA),
iso
-JA, pinostrobin, isoformononetin, rutin, luteolin-7-O-glucoside, porphyrins, chlorophyll, phenolic
glycosides, and terpenoids. Many of these compounds are directly linked to resistance against

environmental stress (Aliferis
et al., 2015).
Similarly, in maize plants, symbiosis with
G. intraradices led to a down-regulation of amino acid
content in the leaves, while secondary metabolism was up
-regulated, specifically for organic acids,
lipids, fatty acids, carotenoids, antioxidants, and carbohydrates. Interestingly, the terpenoids alpha
-
amyrin and beta
-amyrin showed strong accumulation (Gerlach et al., 2015).
In other experiments, four genotypes of barley were analyzed using a mixture of the mycorrhizal fungi

G
. mosseae and G. intraradices. Leaf contents of sucrose, the two major amino acids (glutamic acid
and aspartate), chlorophyll, lutein, and glutathione decreased in response to AMF. Conversely, levels

of free hexoses, central phosphorylated intermediates (3PGA, PEP, RuBP, Glc1P), free
inorganic
phosphate, and the carboxylates isocitrate and malate increased. In general, phosphorylated

intermediates of centr
al metabolism were more abundant in the leaves of AMF-colonized plants (Kogel
et al
., 2010).
Regarding amino acid content in symbiotic associations, rhizobia exhibit the opposite phenomenon: an

increase in metabolites connected to amino acid metabolism and a decrease in those related to plant

stress (Fester
et al., 2011).
Amino acid dynamics have been discussed by Rivero
et al. (2015), particularly their role as precursor
compounds for amino acid
-derived secondary metabolites. Certain amino acids, such as glutamate and
aspartate, are crucial for nitrogen (N) uptake by the AMF extra
-radical mycelium. Other studies have
shown tha
t AMF have a high N demand and retain most of the N acquired as organic compounds for
their own growth (Hodge
& Fitter, 2010). Conversely, increases in amino acid levels have been
interpreted as an ind
icator of enhanced plastid activity in colonized root cells rather than having direct
nutritional significance (Lohse
et al., 2005; Schliemann et al., 2008; Fester et al., 2011).
Changes in mycorrhizal roots have been well studied, particularly in the model plant
Medicago
truncatula
and the AMF strain R. irregularis. Compared to other experiments, mycorrhization raised
pág. 2994
the levels of certain amino acids, such as glutamic acid, aspartic acid, and asparagine. It also increased

the concentrations of specific metabolites like trehalose, palmitic and oleic acids, cyclohexanone,

mycorradicin derivatives, daidzein, ononin, and m
alonylononin (Schliemann et al., 2008). Interestingly,
oleic acid has been found to increase spore germination at concentrations of 10
-8 M (Rush et al., 2020).
Years later, Laparre et al. (2014), using the same symbiotic association, performed metabolomics and

biological screens based on gene expression responses, identifying two significant compounds:

propionyl and butyryl carnitines. These new symbiotic signals
may serve as markers of fungal root
colonization, although further studies are required with other AMF species to confirm their universality

(Laparre
et al., 2014).
Root colonization of
L. japonicus by R. irregularis revealed specific lipid responses upon
mycorrhization. Glycosylated sphingolipids (glucosylceramide, dihexosylceramide),

inositolphosphorylceramide, free sterols, sterol esters, sterol glucosides, and acylated sterol glucosides

were detected in
R. irregularis, primarily containing two predominant fatty acids: palmitic acid and
palmitvaccenic acid.

Notable differences between extraradical mycelium (ERM) and mycorrhizal roots were detected;

specifically, some of the major phosphatidylcholine (PC) molecular species present in the ERM
such
as those containing palmitvaccenic and tetracosenoic acyl groups
are absent from mycorrhizal roots
(Wewer
et al., 2014).
The amino acid composition of tomato fruits is modified upon colonization with
G. mosseae, which
also accelerates flowering and fruit development while increasing yield. Symbiosis enhances amino

acid abundance, with glutamine and asparagine being the most responsive. In general, mycorrhizal

plants exhibit a higher total free amino acid content
compared to control fruits. Although this metabolic
shift was supported by transcriptomic data, no significant differences were noted in gene expression

within the fr
uits themselves.
The authors propose two possibilities to explain this:

1.
Transport Mechanism: The two amides were not synthesized de novo in the fruit but were
translocated from the host roots. These amino acids are recognized as primary nitrogen transport

compounds from source to sink organs, serving as nitrogen reserves.
pág. 2995
2.
Fungal Synthesis: These amino acids could be synthesized directly by the AMF (Salvioli et al.,
2012).

Analysis of leaves from
R. irregularis colonized plants showed a common core of 850 metabolic
features shared between dicotyledonous and monocotyledonous plants. However, metabolic responses

to AMF were highly species
-specific. For example:
The sugar alcohol mannitol was only detectable in Veronica chamaedrys.
The cyclic polyols pinitol and ononitol were characteristic of Medicago truncatula.
Sorbitol was common to the genus Plantago.
Aucubin and verbascoside were found exclusively in the Plantaginaceae.
Several organic acids from the citric acid cycle (citrate, malate, fumarate, and partially succinate and

isocitrate) decreased under AMF conditions in
P. lanceolata, P. major, V. chamaedrys, and M.
truncatula
, but increased in the grass Poa annua. Interestingly, the grass was the least responsive to
AMF symbiosis, although catalpol
a secondary metabolite involved in direct plant defense was
significantly increased by AMF in
P. lanceolata (Schweiger et al., 2014).
Previously, catalpol has been detected in
G. intraradices hyphae during symbiosis with P. lanceolata.
AMF inoculation led to a decrease in verbascoside content in roots but increased its concentration in

shoots only when fungivores were present. In contrast, AMF inoculation consistently reduced catalpol

concentrations in shoots and had no effect in roots
. While aucubin was detectable in all samples, no
treatment significantly affected its concentration in shoots. Notably, catalpol was consistently found in

AMF hyphae when host plants were exposed to fungivores (Duhamel
et al., 2013).
Finally, when different genotypes of
P. lanceolata (containing high and low levels of iridoid glycosides,
IG) were inoculated with
G. intraradices, results suggested that high root concentrations of aucubin
may have deleterious effects on arbuscular development. Interestingly, AMF increased root aucubin

concentrations specifically in the high
-IG genotype (De Deyn et al., 2009).
The mutant mtha1
-2 is defective in the symbiotic transfer of nutrients across the periarbuscular space,
which precludes phosphate uptake. In this mutant, no changes were observed in leaf metabolite levels
,
such as phosphate, sulfate, nitrate, citrate, fumarate, and chloride
, when compared with wild-type plants
inoculated with AMF (Hubberten
et al., 2015).
pág. 2996
Using the tomato plant as a model, an integrative analysis of the host response to different mycorrhizal

fungi was performed. Levels of 12
-oxo-phytodienoic acid (OPDA) were significantly higher in roots
colonized by
G. mosseae and G. intraradices. While JA levels remained unaltered, its bioactive
derivative, JA
-isoleucine (JA-Ile), and salicylic acid (SA) were higher only in the G. mosseae
association. Abscisic acid (ABA) content did not change in either fungal association. Combined

transcriptional analyses
suggest that the oxylipin pathway could regulate AMF symbiosis, specifically
through jasmonate
-mediated regulation (López-Ráez et al., 2010).
Additionally, the amount of glycolipids in the leaves of mycorrhizal olive trees (
Olea europaea) was
found to be altered. Glycolipid content was higher in plants inoculated with
G. intraradices, which also
increased the levels of alpha
-linolenic acid within the glycolipid fraction (Mechri et al., 2014).
Metabolites and Biotic/Abiotic Stress

Abiotic and biotic stresses adversely affect plant physiology; however, AMF symbiosis can enhance

plant tolerance to varying degrees. The association with AMF influences interactions between plants

and their natural enemies through several mechanisms, incl
uding genetic variability among plants and
fungal species, as well as the susceptibility of these enemies to secondary metabolites triggered by the

AMF
-host interaction.
Enhanced antioxidant capacity in both leaves and roots has been observed in
Trigonella foenum-
graecum
(fenugreek) inoculated with Glomus intraradices under salinity stress. Despite a reduction in
root colonization as salt stress increased, there was a significant rise in the activity of antioxidant

enzymes
, such as superoxide dismutase (SOD), catalase (CAT), ascorbate peroxidase (APX),
peroxidase (PX), and glutathione reductase (GR)
and in the concentration of antioxidant molecules,
including ascorbic acid,
alpha-tocopherol, glutathione, and carotenoids (Evelin & Kapoor, 2014).
Similar findings were previously reported in tomato plants inoculated with
G. mosseae (ZhongQun et
al
., 2007) and G. intraradices (Hajiboland et al., 2010), as well as in Cajanus cajan inoculated with G.
mosseae
, which showed increased osmolyte synthesis and accumulation (Garg & Manchanda, 2009).
Regarding thermal stress, maize plants inoculated with four different AMF species exhibited higher

proline content at low temperatures. Specifically, only
G. etunicatum and G. intraradices showed
elevated levels of malondialdehyde and soluble sugars under these stress conditions (Chen et al., 2014).
pág. 2997
Furthermore, maize plants inoculated with G. etunicatum demonstrated higher stomatal conductance,

alongside improved water status and photosynthetic capacity (Zhu et al., 2010). Conversely, a decrease

in the relative abundance of total free amino acids, pr
oline, formic acid, and succinic acid was detected
in maize plants inoculated with
G. mosseae under salt stress (Sheng et al., 2011).
Glomus
mosseae has been shown to increase the activity of protective enzymes, osmoregulation, and
antioxidant capacity in strawberry leaves. This symbiosis also promotes the accumulation of free proline

and soluble proteins, while improving the transport speed of solubl
e sugars under drought stress (Yin
et al., 2010). These findings align with reports on maize inoculated with
G. etunicatum, where the
symbiosis increased leaf proline content but decreased it in the roots during drought. In these maize

plants
, peroxidase activity was higher in both leaves and roots, whereas superoxide dismutase activity
increased exclusively in the roots (Zhu et al., 2011).

In other studies, tomato plants inoculated with a commercial consortium (
G. mosseae, G. intraradices,
and
Glomus sp.) prioritized the leaf production of essential isoprenoids over non-essential ones,
particularly under drought conditions. The primary volatile compounds emitted were monoterpenes,

including alpha
-thujene, alpha-pinene, delta-4-carene, beta-phellandrene, limonene, and linalool.
Conversely, AMF symbiosis has been found to decrease the root content of volatile isoprenoids while

stimulating the production of other isoprenoid
-derived compounds. These include apocarotenoids and
strigolactones, which originate from the oxidative cleava
ge of carotenoids. Both groups are vital for
various growth processes, with strigolactones being particularly crucial for the functional establishment

of the AMF symbiosis. Authors suggest that this shifts carbon allocation toward specific secondary

compou
nds, as all isoprenoids share common precursors (Asensio et al., 2012).
In relation to
amino acid profiles, mycorrhization in Calopogonium mucunoides inoculated with G.
etunicatum
during heavy metal exposure led to an increase in foliar levels of aspartate, glutamine,
glycine, threonine, alanine, isoleucine, and gamma
-aminobutyric acid (GABA). In contrast, a depletion
of asparagine, histidine, and arginine was observed. Notably, on
ly amino acids derived from 3-
phosphoglycerate and pyruvate were significantly higher in mycorrhizal plants (Souza et al., 2014).

Furthermore, in chicory plants inoculated with
Rhizophagus irregularis, an accumulation of caffeic acid
derivatives, such as caftaric and chicoric acid, was observed in the shoots. In the roots, the concentration
pág. 2998
of sesquiterpene lactones increased. However, no significant differences were found when plants were

cultivated on substrates enriched with heavy metals such as Zn, Pb, and Cd (Rozpądek et al., 2014).

Sorghum plants were inoculated with a mixture of Plant Growth
-Promoting Bacteria (PGPB) and an
AMF consortium containing
G. intraradices, G. mosseae, G. aggregatum, and G. etunicatum. The
mycorrhizal treatment resulted in the up
-regulation of several metabolites; notably, five were
exclusively up
-regulated in the mycorrhizal group: glycerol-3-galactoside, erythrose, adenine, 5-
methoxytryptamine, and 4
-hydroxybenzoate. Furthermore, five metabolic pathways were up-regulated,
including arginine and proline metabolism and starch and sucrose metabolism. These changes were

associated with enhanced uptake of macronutrients, microelements, and heavy metals such as copper

and zinc.

The combined treatment of AMF and
Pseudomonas increased lipid metabolism during the mycorrhizal
symbiosis, accompanied by heightened transcriptional regulation. Additionally, three pathways

involved in amino acid metabolism and energy generation were common to both the mycorrhizal and

Pseudomonas
treatments. These results suggest that mycorrhizae play a role in inducing essential amino
acid precursors and the biosynthesis of plant carbohydrates from fatty acids via glyoxylate and

dicarboxylate metabolism (D
hawi et al., 2016).
In respect of
biotic interactions, G. intraradices has shown a positive effect on herbivores; for instance,
a significant increase in the growth of
Spodoptera littoralis was observed, suggesting that AMF may
improve food quality for certain herbivores (Kempel et al., 2010). Furthermore, AMF can influence

traits mediating plant
-herbivore interactions by altering the relative distribution of secondary
compounds across leave
s, stems, and roots. In asclepias plants inoculated with R. intraradices, F.
mosseae
, G. aggregatum, and C. etunicatum, the inoculation shifted the distribution of cardenolides
between root and shoot tissues. While cardenolides in fine roots occurred at equal concentrations

regardless of treatment, AMF inoculation increased cardenolide non
-polarity in shoots and leaves,
which
are generally considered more toxic than their polar counterparts (Vannette et al., 2013).
Plant responses are also highly dependent on species
-specific fungal colonization. In a study where
strawberry plants were colonized by
G. mosseae and G. fasciculatum, dual colonization had no effect
on
Otiorhynchus sulcatus larvae. However, single-species inoculation reduced larval survival and
pág. 2999
weight. Although the exact mechanism remains unknown, the authors proposed three potential

explanations: physical, nutritional, and/or chemical effects (Gange, 2001). Subsequently, Fontana et al.

(2009) found that
P. lanceolata plants inoculated with G. intraradices emitted lower amounts of
sesquiterpenes during
Spodoptera littoralis herbivory but showed an increased emission of the green
leaf volatile (Z)
-3-hexenyl acetate, which is considered an indirect defense signal.
Medicago truncatula
plants colonized by G. intraradices exhibited increased resistance to the virulent
bacterial pathogen
Xanthomonas campestris. This resistance was associated with transcriptional
changes in both roots and shoots; notably, many of the genes induced in the shoots are predicted to be

involved in stress and defense responses (Liu et al., 2007). Similarly, tomato plants colonized wit
h G.
fasciculatum
showed systemic induced resistance (SIR) to the foliar pathogen Alternaria alternata.
Mycorrhi
zal plants displayed a three-fold increase in lipoxygenase (LOX) activity compared to control
plants, a finding supported by the up
-regulation of genes involved in jasmonic acid (JA) biosynthesis
and salicylic acid (SA) signaling (Nair et al., 2015).

Consistent with these findings, tomato plants inoculated with
F. mosseae demonstrated enhanced
resistance to early blight caused by
Alternaria solani Sorauer. Root colonization induced the expression
of defense
-related enzymes (PR1, PR2, and PR3) and genes (LOX, AOC, and PAL) in the leaves upon
pathogen challenge. These results further suggest that the JA pathway is essential for mediating such

systemi
c responses (Song et al., 2015).
In maize (
Zea mays), inoculation with G. mosseae significantly reduced the incidence and severity of
sheath blight caused by
Rhizoctonia solani. This effect was observed in two varieties: Gaoyou-115
(susceptible) and Yuenong
-9 (resistant). The symbiosis led to a significant increase in 2,4-dihydroxy-
7
-methoxy-2H-1,4-benzoxazin-3(4H)-one (DIMBOA), a critical phytoalexin in maize involved in
system
ic defense. DIMBOA accumulation occurred in the roots of both varieties and specifically in the
leaves of the res
istant plants. These chemical changes were supported by the strong activation of
defense
-related genes, including BX9-a key gene in the DIMBOA biosynthetic pathway-in the leaves
of both varieties (Song et al., 2011).
pág. 3000
CONCLUSIONS

Mycorrhizal colonization induces systemic metabolic shifts that extend from the roots to the aerial

components of the host plant. By integrating advanced analytical techniques, it is possible to

characterize a vast array of secondary metabolites regulated
by the AMF symbiosis. Plant roots not only
synthesize specific compounds triggered by AMF but also enhance the biosynthesis of various

metabolites in aerial tissues, such as leaves, stems, and fruits.

These symbiotic interactions typically lead to an increased concentration of antioxidants, phenolics,

phytoalexins, organic acids, amino acids, lipids, fatty acids, carotenoids, terpenoids, flavonoids,

isoflavonoids, and polyamines. Conversely, the symbios
is may also result in the depletion of precursor
molecules as they are channeled into secondary metabolic pathways.

While the precise mechanisms by which AMF modulate metabolite concentrations remain to be fully

elucidated, the current literature indicates a frequent reduction in free amino acid pools. This trend

supports the hypothesis that these amino acids serve as p
rimary substrates for the synthesis of more
complex secondary compounds in both roots and shoots.

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